PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012569914.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 329aa    MW: 35879 Da    PI: 6.4497
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012569914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.85.7e-3449103155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_012569914.1  49 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103
                     79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.48546106IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-3248104IPR009057Homeodomain-like
SuperFamilySSF466898.42E-1848103IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-2549104IPR006447Myb domain, plants
PfamPF002491.3E-951102IPR001005SANT/Myb domain
PfamPF143791.8E-23136182IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MYHPSNDPNS SLIGSNSLVH GQHIDCGRSA MDPGNGGSNL ANNSNLASKQ RLRWTHELHE  60
RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDEGKKADK  120
KEAGDMLSNL DGSSGMQITE ALKLQMEVQK RLHEQLEVQR QLQLRIEAQG KYLKKIIEEQ  180
QRLSGVLSEA PGSGIAAPTP GDMCQELDNK SDPATPDPEK AAKEHAPAKS LSVESFSSHH  240
EPTTPDSGCQ LVSPADSPEG ERSSKKQRVS VEGTYSKQDM VLPHQILESS MSSYQQQTTI  300
FLTQDHFDPS LGISSGSGEE MDKLGGRNM
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1436180.0BT143618.1 Medicago truncatula clone JCVI-FLMt-6M11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012569914.10.0PREDICTED: myb family transcription factor APL
RefseqXP_004486395.10.0PREDICTED: myb family transcription factor APL
RefseqXP_004486394.10.0PREDICTED: myb family transcription factor APL
TrEMBLG7ISP00.0G7ISP0_MEDTR; Myb-like transcription factor family protein
STRINGGLYMA15G12940.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-97G2-like family protein